starling
Getting Started
Getting Started
Installation
Command Line Interface
Core Workflows
Ensemble Generation
Guided Sampling with Constraints
Performance Optimization
Sequence Embeddings
Working with Ensembles
BME Reweighting
Utilities
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Similarity Search
Possible Issues and Solutions
API Reference
API reference
High-level functions
Structure & Ensembles
Frontend
Inference
starling.inference
starling.inference.benchmark_mds
starling.inference.constraints
starling.inference.evaluate_vae
starling.inference.generation
starling.inference.model_loading
starling.inference.generation
starling.inference.constraints
starling.inference.model_loading
starling.inference.evaluate_vae
starling.inference.evaluate_vae.finches_potential_energy
starling.inference.evaluate_vae.get_errors
starling.inference.evaluate_vae.int_to_seq
starling.inference.evaluate_vae.load_hdf5_compressed
starling.inference.evaluate_vae.main
starling.inference.evaluate_vae.prepare_data
starling.inference.evaluate_vae.read_input_file
starling.inference.evaluate_vae.reconstruct
starling.inference.evaluate_vae.symmetrize
starling.inference.benchmark_mds
Models
Samplers
Data Processing
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Configuration & Utilities
Training
starling
API reference
starling.inference
starling.inference.evaluate_vae
starling.inference.evaluate_vae.prepare_data
View page source
starling.inference.evaluate_vae.prepare_data
prepare_data
(
data
)
[source]
Prepare the data for inference.