starling.structure.coordinates ============================== .. automodule:: starling.structure.coordinates :no-members: .. rubric:: Functions .. autosummary:: :toctree: :nosignatures: compare_distance_matrices compute_pairwise_distances create_ca_topology_from_coords create_incremental_coordinates distance_matrix_to_3d_structure_gd distance_matrix_to_3d_structure_mds distance_matrix_to_3d_structure_torch_mds generate_3d_coordinates_from_distances get_tensor_dtype loss_function save_trajectory