starling.search.search_utils.SequenceIdentityFilter

class SequenceIdentityFilter[source]

Bases: CandidateFilter

Filter by maximum sequence identity.

Methods

`__init__`
`apply`	Return True if candidate passes filter.
`get_name`	Return filter name for logging.

__init__(max_identity: float, denominator: str, seq_store: SequenceStore, identity_func)[source]

apply(candidate: Candidate, query_seq: str | None = None) → bool[source]: Return True if candidate passes filter.